PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.UAK9J
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 90aa    MW: 10194.5 Da    PI: 8.5247
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.UAK9JgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.13.7e-0918581454
                 HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH 14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                 d+i++  ++L++llP+ + +++  K+s a +L+++++YI+sL
  Araip.UAK9J 18 DQIKDLVSKLQQLLPEiR-HTRTDKVSSAKVLQETCNYIRSL 58
                 689*************77.9********************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.921458IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.01E-91876IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.5E-91873IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-61858IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009742Biological Processbrassinosteroid mediated signaling pathway
GO:0010086Biological Processembryonic root morphogenesis
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    Send to blast
MSSRRSRQTS GSSNISDDQI KDLVSKLQQL LPEIRHTRTD KVSSAKVLQE TCNYIRSLHR  60
EVDDLSERLS ELLATTDTAQ AALIRNLLLQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016176744.11e-57PREDICTED: transcription factor PRE3
SwissprotQ9CA643e-36PRE3_ARATH; Transcription factor PRE3
TrEMBLA0A0L9VNK98e-44A0A0L9VNK9_PHAAN; Uncharacterized protein
TrEMBLA0A0S3RGB38e-44A0A0S3RGB3_PHAAN; Uncharacterized protein
STRINGGLYMA04G34080.18e-42(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56734143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74500.13e-28activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1